Pattern Formation with a Compartmental Lateral Inhibition System

Ana Sofia Rufino Ferreira, Justin Hsia, Murat Arcak, Michel Maharbiz, Adam Arkin

Published 2014-07-24Version 1

We propose a compartmental lateral inhibition system that generates contrasting patterns of gene expression between neighboring compartments. The system consists of a set of compartments interconnected by channels. Each compartment contains a colony of cells that produce diffusible molecules to be detected by the neighboring colony, and each cell is equipped with an inhibitory circuit that reduces its production when the detected signal is stronger. We develop a technique to analyze the steady-state patterns emerging from this lateral inhibition system and apply it to a specific implementation. The analysis shows that the proposed system indeed exhibits contrasting patterns within realistic parameter ranges.