Spanning trees for the geometry and dynamics of compact polymers

Armin Rahmani, Andrea Velenich, Claudio Chamon

Published 2010-02-17, updated 2010-03-11Version 2

Using a mapping of compact polymers on the Manhattan lattice to spanning trees, we calculate exactly the average number of bends at infinite temperature. We then find, in a high temperature approximation, the energy of the system as a function of bending rigidity and polymer elasticity. We identify the universal mechanism for the relaxation of compact polymers and then endow the model with physically motivated dynamics in the convenient framework of the trees. We find aging and domain coarsening after quenches in temperature. We explain the slow dynamics in terms of the geometrical interconnections between the energy and the dynamics.