{ "id": "1004.1090", "version": "v1", "published": "2010-04-07T13:44:26.000Z", "updated": "2010-04-07T13:44:26.000Z", "title": "Fast algorithms for classical $X\\to 0$ diffusion-reaction processes", "authors": [ "Fabrice Thalmann", "Nam-Kyung Lee" ], "comment": "10 pages, 3 tables, 15 figures", "journal": "Journal of Chemical Physics 130, 074102 (2009)", "doi": "10.1063/1.3072706", "categories": [ "cond-mat.stat-mech", "physics.comp-ph" ], "abstract": "The Doi formalism treats a reaction-diffusion process as a quantum many-body problem. We use this second quantized formulation as a starting point to derive a numerical scheme for simulating $X\\to 0$ reaction-diffusion processes, following a well-established time discretization procedure. In the case of a reaction zone localized in the configuration space, this formulation provides also a systematic way of designing an optimized, multiple time step algorithm, spending most of the computation time to sample the configurations where the reaction is likely to occur.", "revisions": [ { "version": "v1", "updated": "2010-04-07T13:44:26.000Z" } ], "analyses": { "subjects": [ "82.20.Wt" ], "keywords": [ "diffusion-reaction processes", "fast algorithms", "multiple time step algorithm", "doi formalism treats", "well-established time discretization procedure" ], "tags": [ "journal article" ], "publication": { "publisher": "AIP", "journal": "Journal of Chemical Physics", "year": 2009, "month": "Feb", "volume": 130, "number": 7, "pages": 4102 }, "note": { "typesetting": "TeX", "pages": 10, "language": "en", "license": "arXiv", "status": "editable", "adsabs": "2009JChPh.130g4102T" } } }